vaultbase

VaultBase vs Obsidian

Obsidian is an excellent personal knowledge tool. VaultBase starts where Obsidian stops — team RBAC, permission-scoped AI, decision traces, and a self-hostable server — all using the same plain markdown vault format you already know.

VaultBase
Obsidian
Plain markdown files
Yes
 
Yes
Wikilinks & backlinks
Yes
 
Yes
Team RBAC (roles, groups, folders)
Yes
 
MCP AI agent access
Yes
 
Permission-scoped AI
Yes
 
Decision traces
Yes
 
Context graph
Yes
 
Audit logs
Yes
 
Self-hostable server
Yes
 
Plugin ecosystem
Growing
 
1,700+
Offline editing
Yes
 
Yes
Cloud sync (1 user)
$4/mo
 
$4/mo

Team RBAC without giving up markdown

Obsidian vaults are single-user by design. Sharing means copying folders or using third-party Git workflows with no permission model. VaultBase adds real RBAC — roles, groups, folder-level and file-level permissions, deny-wins logic — on top of the same plain markdown files. Your team gets scoped access without leaving the vault format.

Permissions use a {user} expansion pattern, so personal folders, shared project spaces, and sensitive policy docs coexist in one vault with clear boundaries.

MCP access for AI agents

Obsidian has community AI plugins, but none expose your vault to external agents through a standardized protocol. VaultBase ships an MCP server with 25 tools — search, read, write-back, trace queries, intelligence briefings — all respecting RBAC. An AI agent can only see what the calling user is allowed to see.

This matters for teams using Claude Code, Cursor, or custom agents. Your knowledge base becomes a living context source without exposing confidential docs to the wrong model or user.

Decision traces and context graph

Obsidian has no built-in concept of a "decision." VaultBase decision traces are markdown files with structured frontmatter linking inputs (docs read), policies (rules applied), and reasoning. The context graph tracks these relationships, flags stale references when source docs change, and detects contradictions between decisions.

When an agent asks "has this been decided before?", VaultBase returns precedent decisions with full provenance — not just keyword matches.

Self-hostable single binary

Obsidian Sync is a proprietary service — you cannot run your own sync server. VaultBase is a single Go binary (AGPL-3.0) you can run anywhere: a VPS, your company's infrastructure, or behind a corporate firewall. The cloud option starts at $4/mo if you prefer managed hosting, but you always have the choice to self-host with zero licensing cost.

What Obsidian does well

Credit where it's due — Obsidian is a remarkable tool, and we're fans of the vault-format approach it popularized.

  • Massive plugin ecosystem. 1,700+ community plugins cover almost every workflow imaginable, from Kanban boards to Dataview queries.
  • Polished editor. Years of refinement make the Obsidian editor one of the best markdown writing experiences available, with live preview, callouts, and Canvas.
  • Large community. Active forums, Discord, and a deep library of tutorials, workflows, and templates.
  • Fully offline. Obsidian works entirely locally with no server dependency — ideal for solo users who want zero cloud involvement.

Who should choose VaultBase

  • Teams that need access control — engineering orgs, agencies, or companies where not everyone should see everything.
  • AI-forward workflows — if you use Claude Code, MCP agents, or want your knowledge base to feed AI context with permission scoping.
  • Decision-heavy environments — architecture teams, policy groups, or any org that needs to track why decisions were made and detect when they go stale.
  • Self-hosting requirements — regulated industries, air-gapped networks, or teams that need full data sovereignty.

If you're a solo user happy with Obsidian's plugin ecosystem and don't need team features or AI agent access, Obsidian is a great choice. VaultBase is built for the use cases Obsidian wasn't designed to solve.

Migrating from Obsidian

VaultBase uses the same vault format as Obsidian — plain markdown with wikilinks and YAML frontmatter. Migration is straightforward:

  1. 1. Point VaultBase at your existing Obsidian vault directory — your files work as-is.
  2. 2. VaultBase indexes your content for FTS5 search and builds the context graph automatically.
  3. 3. Set up RBAC rules for your team — assign roles, define folder permissions, create groups.
  4. 4. Connect your AI agents via MCP. They'll see only what each user's permissions allow.

No export step, no format conversion, no data loss. You can even keep using Obsidian as an editor alongside VaultBase's server and sync.

Learn more

Switch from Obsidian

Download VaultBase free. Your markdown, your rules.

Open source. AGPL-3.0. Plain markdown files. Export anytime.